Disease: Diabetes Mellitus, Insulin-Dependent
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs3134943
AGPAT1 ; MIR6833 ; RNF5
0.882 0.240 6 32179984 intron variant T/A;C snv 0.89 3
rs2227956
HSPA1L
0.752 0.400 6 31810495 missense variant G/A;C;T snv 0.87 12
rs3129888
HLA-DRA
0.882 0.240 6 32443949 intron variant G/A snv 0.82 0.80 4
rs3129941
TSBP1 ; TSBP1-AS1
0.882 0.240 6 32369909 missense variant A/G;T snv 0.81 3
rs3130617
BAG6 ; C6orf47
0.925 0.200 6 31659746 missense variant C/T snv 0.79 0.74 2
rs1799983
NOS3
0.430 0.880 7 150999023 missense variant T/A;G snv 0.75 246
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs2228570
VDR
0.521 0.760 12 47879112 start lost A/C;G;T snv 0.63 99
rs2256965
LST1
0.925 0.200 6 31587353 non coding transcript exon variant A/G;T snv 0.60 2
rs185819
TNXB
0.851 0.200 6 32082290 missense variant T/A;C;G snv 8.2E-06; 0.58; 4.1E-06 10
rs237025
SUMO4 ; TAB2
0.672 0.360 6 149400554 missense variant G/A snv 0.55 0.57 26
rs9268831
HLA-DRB9
0.851 0.280 6 32459971 non coding transcript exon variant C/T snv 0.54 0.51 4
rs1884444
IL23R ; C1orf141
0.637 0.600 1 67168129 missense variant G/T snv 0.52 0.51 34
rs763361
CD226
0.689 0.520 18 69864406 missense variant T/A;C snv 4.0E-06; 0.52 21
rs7975232
VDR
0.576 0.760 12 47845054 intron variant C/A snv 0.51 0.55 56
rs2239804
HLA-DRA
0.851 0.240 6 32443746 intron variant T/A;C snv 0.51 5
rs1990760
IFIH1
0.672 0.480 2 162267541 missense variant C/T snv 0.50 0.45 33
rs1801274
FCGR2A
0.597 0.800 1 161509955 missense variant A/C;G snv 4.0E-06; 0.48 46
rs2229080
DCC
0.742 0.320 18 52906232 missense variant C/A;G snv 0.45 16
rs5498
ICAM4 ; ICAM1
0.531 0.760 19 10285007 missense variant A/G snv 0.44 0.37 99
rs2076530
TSBP1-AS1 ; BTNL2
0.724 0.640 6 32396039 missense variant T/C snv 0.42 0.40 17
rs231775
CTLA4
0.504 0.720 2 203867991 missense variant A/G;T snv 0.42; 4.0E-06 115
rs11614913
HOXC6 ; MIR196A2
0.512 0.760 12 53991815 mature miRNA variant C/T snv 0.39 0.34 111
rs2228145
IL6R
0.602 0.720 1 154454494 missense variant A/C;T snv 0.38; 1.2E-05 57